Index

A

add() (pysr3.logger.Logger method) aic() (pysr3.linear.oracles.LinearOracle method) (pysr3.linear.oracles.LinearOracleSR3 method)

append() (pysr3.logger.Logger method)

B

beta_gamma_to_x() (pysr3.lme.oracles.LinearLMEOracle static method)

bic() (pysr3.linear.oracles.LinearOracle method) (pysr3.linear.oracles.LinearOracleSR3 method)

C

CADLmeModel (class in pysr3.lme.models) CADLmeModelSR3 (class in pysr3.lme.models)

CADRegularizer (class in pysr3.regularizers) check_is_fitted() (pysr3.linear.models.LinearModel method) (pysr3.lme.models.LMEModel method)

D

demarginalized_loss() (pysr3.lme.oracles.LinearLMEOracle method)

DummyRegularizer (class in pysr3.regularizers)

E

ElasticRegularizer (class in pysr3.regularizers)

F

FakePGDSolver (class in pysr3.solvers) find_optimal_parameters() (pysr3.linear.oracles.LinearOracleSR3 method) (pysr3.lme.oracles.LinearLMEOracleSR3 method) find_optimal_parameters_ip() (pysr3.lme.oracles.LinearLMEOracleSR3 method) fit() (pysr3.linear.models.LinearModel method) (pysr3.lme.models.LMEModel method) fit_problem() (pysr3.linear.models.LinearModel method) (pysr3.lme.models.LMEModel method) flip_probabilities_beta() (pysr3.lme.oracles.LinearLMEOracle method) forget() (pysr3.linear.oracles.LinearOracle method) (pysr3.linear.oracles.LinearOracleSR3 method) (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.priors.GaussianPriorLME method) (pysr3.lme.priors.NonInformativePriorLME method) (pysr3.priors.GaussianPrior method) (pysr3.priors.NonInformativePrior method) (pysr3.regularizers.CADRegularizer method) (pysr3.regularizers.L0Regularizer method) (pysr3.regularizers.L0RegularizerLME method) (pysr3.regularizers.L1Regularizer method) (pysr3.regularizers.Regularizer method) (pysr3.regularizers.SCADRegularizer method)

from_dataframe() (pysr3.linear.problems.LinearProblem static method) (pysr3.lme.problems.LMEProblem static method) from_x_y() (pysr3.linear.problems.LinearProblem static method) (pysr3.lme.problems.LMEProblem static method) (pysr3.lme.problems.Problem method)

G

GaussianPrior (class in pysr3.priors) GaussianPriorLME (class in pysr3.lme.priors) generate() (pysr3.linear.problems.LinearProblem static method) (pysr3.lme.problems.LMEProblem static method) get() (pysr3.logger.Logger method) get_condition_numbers() (pysr3.lme.oracles.LinearLMEOracle method) get_ic() (pysr3.lme.oracles.LinearLMEOracle method) get_information_criterion() (pysr3.linear.models.SimpleLinearModel method) (pysr3.linear.models.SimpleLinearModelSR3 method) (pysr3.lme.models.SimpleLMEModel method) (pysr3.lme.models.SimpleLMEModelSR3 method) get_model() (in module pysr3.lme.model_selectors) get_n_splits() (pysr3.lme.problems.LMEStratifiedShuffleSplit method) get_per_group_coefficients() (in module pysr3.lme.problems)

gradient() (pysr3.linear.oracles.LinearOracle method) (pysr3.priors.GaussianPrior method) (pysr3.priors.NonInformativePrior static method) gradient_beta() (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method) (pysr3.lme.priors.GaussianPriorLME method) (pysr3.lme.priors.NonInformativePriorLME method) gradient_gamma() (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method) (pysr3.lme.priors.GaussianPriorLME method) (pysr3.lme.priors.NonInformativePriorLME method) gradient_value_function() (pysr3.linear.oracles.LinearOracle method) (pysr3.linear.oracles.LinearOracleSR3 method) (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method)

H

hessian() (pysr3.linear.oracles.LinearOracle method) (pysr3.priors.GaussianPrior method) (pysr3.priors.NonInformativePrior static method) hessian_beta() (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method) (pysr3.lme.priors.GaussianPriorLME method) (pysr3.lme.priors.NonInformativePriorLME method)

hessian_beta_gamma() (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.priors.GaussianPriorLME method) (pysr3.lme.priors.NonInformativePriorLME method) hessian_gamma() (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method) (pysr3.lme.priors.GaussianPriorLME method) (pysr3.lme.priors.NonInformativePriorLME method)

I

instantiate() (pysr3.linear.models.LinearCADModel method) (pysr3.linear.models.LinearCADModelSR3 method) (pysr3.linear.models.LinearL0Model method) (pysr3.linear.models.LinearL0ModelSR3 method) (pysr3.linear.models.LinearL1Model method) (pysr3.linear.models.LinearL1ModelSR3 method) (pysr3.linear.models.LinearModel method) (pysr3.linear.models.LinearSCADModel method) (pysr3.linear.models.LinearSCADModelSR3 method) (pysr3.linear.models.SimpleLinearModel method) (pysr3.linear.models.SimpleLinearModelSR3 method) (pysr3.linear.oracles.LinearOracle method) (pysr3.linear.oracles.LinearOracleSR3 method) (pysr3.lme.models.CADLmeModel method) (pysr3.lme.models.CADLmeModelSR3 method) (pysr3.lme.models.L0LmeModel method) (pysr3.lme.models.L0LmeModelSR3 method) (pysr3.lme.models.L1LmeModel method) (pysr3.lme.models.L1LmeModelSR3 method) (pysr3.lme.models.LMEModel method) (pysr3.lme.models.SCADLmeModel method) (pysr3.lme.models.SCADLmeModelSR3 method) (pysr3.lme.models.SimpleLMEModel method) (pysr3.lme.models.SimpleLMEModelSR3 method) (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.priors.GaussianPriorLME method) (pysr3.lme.priors.NonInformativePriorLME method) (pysr3.priors.GaussianPrior method) (pysr3.priors.NonInformativePrior method) (pysr3.regularizers.CADRegularizer method) (pysr3.regularizers.ElasticRegularizer method) (pysr3.regularizers.L0Regularizer method) (pysr3.regularizers.L0RegularizerLME method) (pysr3.regularizers.L1Regularizer method) (pysr3.regularizers.PositiveQuadrantRegularizer method) (pysr3.regularizers.Regularizer method) (pysr3.regularizers.SCADRegularizer method)

J

joint_gradient() (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method) joint_loss() (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method)

jones2010bic() (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method)

L

L0LmeModel (class in pysr3.lme.models) L0LmeModelSR3 (class in pysr3.lme.models) L0Regularizer (class in pysr3.regularizers) L0RegularizerLME (class in pysr3.regularizers) L1LmeModel (class in pysr3.lme.models) L1LmeModelSR3 (class in pysr3.lme.models) L1Regularizer (class in pysr3.regularizers) LinearCADModel (class in pysr3.linear.models) LinearCADModelSR3 (class in pysr3.linear.models) LinearL0Model (class in pysr3.linear.models) LinearL0ModelSR3 (class in pysr3.linear.models) LinearL1Model (class in pysr3.linear.models) LinearL1ModelSR3 (class in pysr3.linear.models) LinearLMEOracle (class in pysr3.lme.oracles) LinearLMEOracleSR3 (class in pysr3.lme.oracles) LinearModel (class in pysr3.linear.models) LinearOracle (class in pysr3.linear.oracles)

LinearOracleSR3 (class in pysr3.linear.oracles) LinearProblem (class in pysr3.linear.problems) LinearSCADModel (class in pysr3.linear.models) LinearSCADModelSR3 (class in pysr3.linear.models) LMEModel (class in pysr3.lme.models) LMEProblem (class in pysr3.lme.problems) LMEStratifiedShuffleSplit (class in pysr3.lme.problems) log() (pysr3.logger.Logger method) Logger (class in pysr3.logger) loss() (pysr3.linear.oracles.LinearOracle method) (pysr3.linear.oracles.LinearOracleSR3 method) (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method) (pysr3.lme.priors.GaussianPriorLME method) (pysr3.lme.priors.NonInformativePriorLME method) (pysr3.priors.GaussianPrior method) (pysr3.priors.NonInformativePrior static method)

M

module pysr3 pysr3.linear pysr3.linear.models pysr3.linear.oracles pysr3.linear.problems pysr3.lme pysr3.lme.model_selectors pysr3.lme.models pysr3.lme.oracles pysr3.lme.priors pysr3.lme.problems pysr3.logger pysr3.priors pysr3.regularizers pysr3.solvers

muller_hui_2016ic() (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method)

N

NonInformativePrior (class in pysr3.priors)

NonInformativePriorLME (class in pysr3.lme.priors)

O

optimal_beta() (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method) optimal_gamma() (pysr3.lme.oracles.LinearLMEOracle method) optimal_gamma_ip() (pysr3.lme.oracles.LinearLMEOracle method) optimal_gamma_pgd() (pysr3.lme.oracles.LinearLMEOracle method)

optimal_random_effects() (pysr3.lme.oracles.LinearLMEOracle method) optimal_tbeta() (pysr3.regularizers.L0RegularizerLME method) optimal_tgamma() (pysr3.regularizers.L0RegularizerLME method) optimize() (pysr3.solvers.FakePGDSolver method) (pysr3.solvers.PGDSolver method)

P

PGDSolver (class in pysr3.solvers) PositiveQuadrantRegularizer (class in pysr3.regularizers) predict() (pysr3.linear.models.LinearModel method) (pysr3.lme.models.LMEModel method) predict_problem() (pysr3.linear.models.LinearModel method) (pysr3.lme.models.LMEModel method) Prior (class in pysr3.priors) Problem (class in pysr3.lme.problems) prox() (pysr3.regularizers.CADRegularizer method) (pysr3.regularizers.DummyRegularizer method) (pysr3.regularizers.ElasticRegularizer method) (pysr3.regularizers.L0Regularizer method) (pysr3.regularizers.L0RegularizerLME method) (pysr3.regularizers.L1Regularizer method) (pysr3.regularizers.PositiveQuadrantRegularizer method) (pysr3.regularizers.Regularizer method) (pysr3.regularizers.SCADRegularizer method) pysr3 module pysr3.linear module pysr3.linear.models module

pysr3.linear.oracles module pysr3.linear.problems module pysr3.lme module pysr3.lme.model_selectors module pysr3.lme.models module pysr3.lme.oracles module pysr3.lme.priors module pysr3.lme.problems module pysr3.logger module pysr3.priors module pysr3.regularizers module pysr3.solvers module

R

random_effects_to_matrix() (in module pysr3.lme.problems)

Regularizer (class in pysr3.regularizers)

S

SCADLmeModel (class in pysr3.lme.models) SCADLmeModelSR3 (class in pysr3.lme.models) SCADRegularizer (class in pysr3.regularizers) score() (pysr3.lme.models.LMEModel method) select_covariates() (in module pysr3.lme.model_selectors)

SimpleLinearModel (class in pysr3.linear.models) SimpleLinearModelSR3 (class in pysr3.linear.models) SimpleLMEModel (class in pysr3.lme.models) SimpleLMEModelSR3 (class in pysr3.lme.models) split() (pysr3.lme.problems.LMEStratifiedShuffleSplit method)

T

to_dataframe() (pysr3.lme.problems.LMEProblem method) to_x_y() (pysr3.linear.problems.LinearProblem method) (pysr3.lme.problems.LMEProblem method) (pysr3.lme.problems.Problem method)

V

vaida2005aic() (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method) value() (pysr3.regularizers.CADRegularizer method) (pysr3.regularizers.DummyRegularizer method) (pysr3.regularizers.ElasticRegularizer method) (pysr3.regularizers.L0Regularizer method) (pysr3.regularizers.L0RegularizerLME method) (pysr3.regularizers.L1Regularizer method) (pysr3.regularizers.PositiveQuadrantRegularizer method) (pysr3.regularizers.Regularizer method) (pysr3.regularizers.SCADRegularizer method)

value_function() (pysr3.linear.oracles.LinearOracle method) (pysr3.linear.oracles.LinearOracleSR3 method) (pysr3.lme.oracles.LinearLMEOracle method) (pysr3.lme.oracles.LinearLMEOracleSR3 method)

X

x_to_beta_gamma() (pysr3.lme.oracles.LinearLMEOracle method)